Carnation DB

Dca10115.1

Annotation

5-exons
f-1
sp|D7LHG4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_484008#GO:0006869#0F1P0C
AT2G48140.1 | Symbols: EDA4 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr2:19686442-19687444 FORWARD LENGTH=200
Repeat List (scaffold144)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10115.1	1	151	190	38.42	151	49	6e-28
Target_name	Start	End	Length	Cov(%)
sp\|D7LHG4_ARALL	31	176	202	72.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10115.1	1	114	190	33.15	114	55	3e-28
Target_name	Start	End	Length	Cov(%)
AT2G48140.1	31	145	200	57.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold144	Augustus	mRNA	119476	120674	.	+	.	ID=Dca10115.1;Parent=Dca10115
scaffold144	Augustus	exon	119476	119707	.	+	.	ID=Dca10115.1.exon1;Parent=Dca10115.1
scaffold144	Augustus	exon	119923	119949	.	+	.	ID=Dca10115.1.exon2;Parent=Dca10115.1
scaffold144	Augustus	exon	120060	120116	.	+	.	ID=Dca10115.1.exon3;Parent=Dca10115.1
scaffold144	Augustus	exon	120227	120277	.	+	.	ID=Dca10115.1.exon4;Parent=Dca10115.1
scaffold144	Augustus	exon	120469	120674	.	+	.	ID=Dca10115.1.exon5;Parent=Dca10115.1