Dca10215.1
Annotation
- 4-exons
- f-1
- sp|A9P851_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_825619#GO:0005524;GO:0008026;GO:0003676#3F0P0C
- Os02t0146600-01 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A).
- Repeat List (scaffold1445)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10215.1 |
1 |
412 |
412 |
92.71 |
412 |
93 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9P851_POPTR |
1 |
413 |
413 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10215.1 |
1 |
412 |
412 |
91.99 |
412 |
92 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0146600-01 |
1 |
414 |
415 |
99.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1445 |
Augustus |
mRNA |
4292 |
6429 |
. |
+ |
. |
ID=Dca10215.1;Parent=Dca10215 |
| scaffold1445 |
Augustus |
exon |
4292 |
4356 |
. |
+ |
. |
ID=Dca10215.1.exon1;Parent=Dca10215.1 |
| scaffold1445 |
Augus-PASA |
exon |
4516 |
4622 |
. |
+ |
. |
ID=Dca10215.1.exon2;Parent=Dca10215.1 |
| scaffold1445 |
Augus-PASA |
exon |
4722 |
5152 |
. |
+ |
. |
ID=Dca10215.1.exon3;Parent=Dca10215.1 |
| scaffold1445 |
Augus-PASA |
exon |
5794 |
6429 |
. |
+ |
. |
ID=Dca10215.1.exon4;Parent=Dca10215.1 |
