Carnation DB

Dca10226.1

Annotation

5-exons
f-1
sp|B9SJK7_RICCO#Thylakoid lumenal 29.8 kDa protein, chloroplast, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0138880#GO:0019898;GO:0009654;GO:0005509;GO:0015979#1F1P2C
Repeat List (scaffold1446)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10226.1	8	228	228	78.5	221	81	1e-100
Target_name	Start	End	Length	Cov(%)
sp\|B9SJK7_RICCO	53	270	270	80.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10226.1	9	228	228	77.63	220	81	2e-100
Target_name	Start	End	Length	Cov(%)
AT1G77090.1	45	260	260	83.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1446	Augustus	mRNA	4708	6265	.	-	.	ID=Dca10226.1;Parent=Dca10226
scaffold1446	Augustus	exon	4708	4772	.	-	.	ID=Dca10226.1.exon1;Parent=Dca10226.1
scaffold1446	Augustus	exon	4918	5145	.	-	.	ID=Dca10226.1.exon2;Parent=Dca10226.1
scaffold1446	Augus-PASA	exon	5316	5427	.	-	.	ID=Dca10226.1.exon3;Parent=Dca10226.1
scaffold1446	Augus-PASA	exon	5510	5613	.	-	.	ID=Dca10226.1.exon4;Parent=Dca10226.1
scaffold1446	Augus-PASA	exon	6088	6265	.	-	.	ID=Dca10226.1.exon5;Parent=Dca10226.1