Carnation DB

Dca10312.1

Annotation

19-exons
f-1
sp|F6HPJ0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g01010#GO:0005634;GO:0006355#0F1P1C
Os01t0109700-01 Similar to Paired amphipathic helix repeat-containing protein / transcription regulator-related.
Repeat List (scaffold145)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10312.1	3	210	1274	10.2	208	56	1e-60
Target_name	Start	End	Length	Cov(%)
sp\|F6HPJ0_VITVI	23	255	1451	16.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10312.1	29	219	1274	7.53	191	49	8e-38
Target_name	Start	End	Length	Cov(%)
Os01t0109700-01	8	191	1327	13.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold145	Augustus	mRNA	217344	225842	.	+	.	ID=Dca10312.1;Parent=Dca10312
scaffold145	Augustus	exon	217344	217432	.	+	.	ID=Dca10312.1.exon1;Parent=Dca10312.1
scaffold145	Augustus	exon	217621	217807	.	+	.	ID=Dca10312.1.exon2;Parent=Dca10312.1
scaffold145	Augustus	exon	218132	218230	.	+	.	ID=Dca10312.1.exon3;Parent=Dca10312.1
scaffold145	Augustus	exon	218317	218484	.	+	.	ID=Dca10312.1.exon4;Parent=Dca10312.1
scaffold145	Augustus	exon	218566	218663	.	+	.	ID=Dca10312.1.exon5;Parent=Dca10312.1
scaffold145	Augustus	exon	218744	218895	.	+	.	ID=Dca10312.1.exon6;Parent=Dca10312.1
scaffold145	Augustus	exon	220039	220319	.	+	.	ID=Dca10312.1.exon7;Parent=Dca10312.1
scaffold145	Augustus	exon	220404	220558	.	+	.	ID=Dca10312.1.exon8;Parent=Dca10312.1
scaffold145	Augustus	exon	220960	221054	.	+	.	ID=Dca10312.1.exon9;Parent=Dca10312.1
scaffold145	Augustus	exon	221182	221436	.	+	.	ID=Dca10312.1.exon10;Parent=Dca10312.1
scaffold145	Augustus	exon	221842	222471	.	+	.	ID=Dca10312.1.exon11;Parent=Dca10312.1
scaffold145	Augustus	exon	223224	223315	.	+	.	ID=Dca10312.1.exon12;Parent=Dca10312.1
scaffold145	Augustus	exon	223553	224176	.	+	.	ID=Dca10312.1.exon13;Parent=Dca10312.1
scaffold145	Augustus	exon	224274	224374	.	+	.	ID=Dca10312.1.exon14;Parent=Dca10312.1
scaffold145	Augustus	exon	224472	224610	.	+	.	ID=Dca10312.1.exon15;Parent=Dca10312.1
scaffold145	Augustus	exon	224695	224847	.	+	.	ID=Dca10312.1.exon16;Parent=Dca10312.1
scaffold145	Augustus	exon	224934	225097	.	+	.	ID=Dca10312.1.exon17;Parent=Dca10312.1
scaffold145	Augustus	exon	225187	225298	.	+	.	ID=Dca10312.1.exon18;Parent=Dca10312.1
scaffold145	Augustus	exon	225612	225842	.	+	.	ID=Dca10312.1.exon19;Parent=Dca10312.1