Carnation DB

Dca10388.1

Annotation

9-exons
f-1
sp|F6HED1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g01480#GO:0003676;GO:0008270#2F0P0C
AT3G02890.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr3:640828-645303 FORWARD LENGTH=994
Repeat List (scaffold1454)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10388.1	1081	1179	1189	4.03	99	41	1e-09
Target_name	Start	End	Length	Cov(%)
sp\|F6HED1_VITVI	1480	1593	1625	7.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10388.1	64	820	1189	22.11	757	33	4e-82
Target_name	Start	End	Length	Cov(%)
AT3G02890.1	191	894	994	70.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1454	Augustus	mRNA	9384	19294	.	+	.	ID=Dca10388.1;Parent=Dca10388
scaffold1454	Augustus	exon	9384	9638	.	+	.	ID=Dca10388.1.exon1;Parent=Dca10388.1
scaffold1454	Augustus	exon	11761	11846	.	+	.	ID=Dca10388.1.exon2;Parent=Dca10388.1
scaffold1454	Augustus	exon	11930	12426	.	+	.	ID=Dca10388.1.exon3;Parent=Dca10388.1
scaffold1454	Augustus	exon	12519	12968	.	+	.	ID=Dca10388.1.exon4;Parent=Dca10388.1
scaffold1454	Augustus	exon	13247	13823	.	+	.	ID=Dca10388.1.exon5;Parent=Dca10388.1
scaffold1454	Augustus	exon	13975	14205	.	+	.	ID=Dca10388.1.exon6;Parent=Dca10388.1
scaffold1454	Augustus	exon	14326	14450	.	+	.	ID=Dca10388.1.exon7;Parent=Dca10388.1
scaffold1454	Augustus	exon	16877	17214	.	+	.	ID=Dca10388.1.exon8;Parent=Dca10388.1
scaffold1454	Augustus	exon	18284	19294	.	+	.	ID=Dca10388.1.exon9;Parent=Dca10388.1