Carnation DB

Dca10606.1

Annotation

5-exons
f-1
sp|B9SCG2_RICCO#Ubiquitin-conjugating enzyme e2S, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1272580#GO:0005524;GO:0004842#2F0P0C
Repeat List (scaffold1468)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10606.1	1	253	253	74.3	253	69	2e-101
Target_name	Start	End	Length	Cov(%)
sp\|B9SCG2_RICCO	2	269	269	99.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10606.1	1	253	253	77.47	253	76	7e-100
Target_name	Start	End	Length	Cov(%)
Os06t0660700-02	32	282	283	88.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1468	Augustus	mRNA	17389	18916	.	+	.	ID=Dca10606.1;Parent=Dca10606
scaffold1468	Augustus	exon	17389	17533	.	+	.	ID=Dca10606.1.exon1;Parent=Dca10606.1
scaffold1468	Augus-PASA	exon	17723	17800	.	+	.	ID=Dca10606.1.exon2;Parent=Dca10606.1
scaffold1468	Augus-PASA	exon	18159	18271	.	+	.	ID=Dca10606.1.exon3;Parent=Dca10606.1
scaffold1468	Augus-PASA	exon	18386	18489	.	+	.	ID=Dca10606.1.exon4;Parent=Dca10606.1
scaffold1468	Augus-PASA	exon	18595	18916	.	+	.	ID=Dca10606.1.exon5;Parent=Dca10606.1