Dca1077.1
Annotation
- 4-exons
- f-1
- sp|B9I832_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570914#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- AT1G08845.2 | Symbols: | Ribosomal L18p/L5e family protein | chr1:2838789-2840955 FORWARD LENGTH=234
- Repeat List (scaffold103)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1077.1 |
74 |
223 |
223 |
60.98 |
150 |
91 |
1e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I832_POPTR |
38 |
187 |
187 |
80.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1077.1 |
77 |
223 |
223 |
56.95 |
147 |
87 |
4e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G08845.2 |
88 |
234 |
234 |
62.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold103 |
Augustus |
mRNA |
133488 |
144231 |
. |
+ |
. |
ID=Dca1077.1;Parent=Dca1077 |
| scaffold103 |
Augustus |
exon |
133488 |
133574 |
. |
+ |
. |
ID=Dca1077.1.exon1;Parent=Dca1077.1 |
| scaffold103 |
Augustus |
exon |
134088 |
134109 |
. |
+ |
. |
ID=Dca1077.1.exon2;Parent=Dca1077.1 |
| scaffold103 |
Augustus |
exon |
136881 |
136990 |
. |
+ |
. |
ID=Dca1077.1.exon3;Parent=Dca1077.1 |
| scaffold103 |
Augustus |
exon |
143779 |
144231 |
. |
+ |
. |
ID=Dca1077.1.exon4;Parent=Dca1077.1 |
