Carnation DB

Dca11110.1

Annotation

7-exons
f-1
sp|D7TCL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g01760#GO:0016787#1F0P0C
sp|B9RK48_RICCO#Pre-mRNA cleavage factor im, 25kD subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1046330#unknown#0F0P0C
Repeat List (scaffold14949)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11110.1	25	218	218	64.67	194	72	1e-78
Target_name	Start	End	Length	Cov(%)
sp\|D7TCL1_VITVI	95	291	291	67.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11110.1	21	217	218	58.71	197	64	3e-73
Target_name	Start	End	Length	Cov(%)
AT4G29820.1	22	221	222	90.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold14949	Augustus	mRNA	1584	3998	.	+	.	ID=Dca11110.1;Parent=Dca11110
scaffold14949	Augustus	exon	1584	1756	.	+	.	ID=Dca11110.1.exon1;Parent=Dca11110.1
scaffold14949	Augustus	exon	1863	1908	.	+	.	ID=Dca11110.1.exon2;Parent=Dca11110.1
scaffold14949	Augustus	exon	2593	2686	.	+	.	ID=Dca11110.1.exon3;Parent=Dca11110.1
scaffold14949	Augustus	exon	2787	2860	.	+	.	ID=Dca11110.1.exon4;Parent=Dca11110.1
scaffold14949	Augustus	exon	3143	3229	.	+	.	ID=Dca11110.1.exon5;Parent=Dca11110.1
scaffold14949	Augustus	exon	3323	3433	.	+	.	ID=Dca11110.1.exon6;Parent=Dca11110.1
scaffold14949	Augustus	exon	3927	3998	.	+	.	ID=Dca11110.1.exon7;Parent=Dca11110.1