Carnation DB

Dca11226.1

Annotation

8-exons
f-493
sp|B9GHT1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_798053#GO:0046522;GO:0009086#1F1P0C
AT1G49820.1 | Symbols: ATMTK, MTK | S-methyl-5-thioribose kinase | chr1:18443005-18444907 FORWARD LENGTH=420
Repeat List (scaffold15)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11226.1	409	570	570	15.78	162	56	2e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9GHT1_POPTR	62	224	418	38.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11226.1	347	570	570	18.07	224	46	1e-48
Target_name	Start	End	Length	Cov(%)
AT1G49820.1	8	226	420	52.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augustus	mRNA	424122	430112	.	+	.	ID=Dca11226.1;Parent=Dca11226
scaffold15	Augustus	exon	424122	424594	.	+	.	ID=Dca11226.1.exon1;Parent=Dca11226.1
scaffold15	Augustus	exon	424808	425078	.	+	.	ID=Dca11226.1.exon2;Parent=Dca11226.1
scaffold15	Augustus	exon	425282	425360	.	+	.	ID=Dca11226.1.exon3;Parent=Dca11226.1
scaffold15	Augustus	exon	426312	426529	.	+	.	ID=Dca11226.1.exon4;Parent=Dca11226.1
scaffold15	Augustus	exon	426647	427063	.	+	.	ID=Dca11226.1.exon5;Parent=Dca11226.1
scaffold15	Augustus	exon	427401	427661	.	+	.	ID=Dca11226.1.exon6;Parent=Dca11226.1
scaffold15	Augustus	exon	429256	429565	.	+	.	ID=Dca11226.1.exon7;Parent=Dca11226.1
scaffold15	Augustus	exon	429937	430112	.	+	.	ID=Dca11226.1.exon8;Parent=Dca11226.1