Carnation DB

Dca11229.1

Annotation

9-exons
f-1
sp|B9MTY2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_589966#GO:0005639#0F0P1C
AT5G46560.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:18888061-18890090 FORWARD LENGTH=387
Repeat List (scaffold15)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11229.1	26	380	397	44.58	355	50	2e-98
Target_name	Start	End	Length	Cov(%)
sp\|B9MTY2_POPTR	9	348	382	89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11229.1	51	380	397	36.77	330	44	1e-74
Target_name	Start	End	Length	Cov(%)
AT5G46560.1	30	353	387	83.72

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augustus	mRNA	458619	463145	.	+	.	ID=Dca11229.1;Parent=Dca11229
scaffold15	Augustus	exon	458619	458949	.	+	.	ID=Dca11229.1.exon1;Parent=Dca11229.1
scaffold15	Augustus	exon	460013	460140	.	+	.	ID=Dca11229.1.exon2;Parent=Dca11229.1
scaffold15	Augustus	exon	460280	460351	.	+	.	ID=Dca11229.1.exon3;Parent=Dca11229.1
scaffold15	Augustus	exon	460461	460624	.	+	.	ID=Dca11229.1.exon4;Parent=Dca11229.1
scaffold15	Augustus	exon	460719	460833	.	+	.	ID=Dca11229.1.exon5;Parent=Dca11229.1
scaffold15	Augustus	exon	460917	460997	.	+	.	ID=Dca11229.1.exon6;Parent=Dca11229.1
scaffold15	Augustus	exon	461715	461849	.	+	.	ID=Dca11229.1.exon7;Parent=Dca11229.1
scaffold15	Augustus	exon	462274	462361	.	+	.	ID=Dca11229.1.exon8;Parent=Dca11229.1
scaffold15	Augustus	exon	463066	463145	.	+	.	ID=Dca11229.1.exon9;Parent=Dca11229.1