Carnation DB

Dca11251.1

Annotation

5-exons
f-1
sp|F6HQW1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g02980#unknown#0F0P0C
Repeat List (scaffold150)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11251.1	1	165	172	57.55	165	49	4e-32
Target_name	Start	End	Length	Cov(%)
sp\|F6HQW1_VITVI	1	199	231	86.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11251.1	53	153	172	36.62	101	63	6e-28
Target_name	Start	End	Length	Cov(%)
Os03t0283300-01	55	149	178	53.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold150	Augus-PASA	mRNA	45633	50367	.	+	.	ID=Dca11251.1;Parent=Dca11251
scaffold150	Augus-PASA	exon	45633	45880	.	+	.	ID=Dca11251.1.exon1;Parent=Dca11251.1
scaffold150	Augus-PASA	exon	49523	49594	.	+	.	ID=Dca11251.1.exon2;Parent=Dca11251.1
scaffold150	Augus-PASA	exon	49800	49931	.	+	.	ID=Dca11251.1.exon3;Parent=Dca11251.1
scaffold150	Augus-PASA	exon	50063	50123	.	+	.	ID=Dca11251.1.exon4;Parent=Dca11251.1
scaffold150	Augus-PASA	exon	50362	50367	.	+	.	ID=Dca11251.1.exon5;Parent=Dca11251.1