Dca11292.1
Annotation
- 4-exons
- f-1
- sp|D7SQC9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0052g00640#GO:0005506;GO:0051536;GO:0016226#2F1P0C
- sp|B9T1G5_RICCO#Nitrogen fixation protein nifU, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1643600#GO:0005506;GO:0051536;GO:0016226#2F1P0C
- Repeat List (scaffold1501)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11292.1 |
18 |
249 |
249 |
66.26 |
232 |
71 |
4e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7SQC9_VITVI |
13 |
236 |
237 |
94.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11292.1 |
58 |
249 |
249 |
55.82 |
192 |
72 |
2e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G25910.1 |
46 |
236 |
236 |
80.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1501 |
Augustus |
mRNA |
20738 |
21808 |
. |
- |
. |
ID=Dca11292.1;Parent=Dca11292 |
| scaffold1501 |
Augustus |
exon |
20738 |
20932 |
. |
- |
. |
ID=Dca11292.1.exon1;Parent=Dca11292.1 |
| scaffold1501 |
Augustus |
exon |
21015 |
21313 |
. |
- |
. |
ID=Dca11292.1.exon2;Parent=Dca11292.1 |
| scaffold1501 |
Augustus |
exon |
21459 |
21582 |
. |
- |
. |
ID=Dca11292.1.exon3;Parent=Dca11292.1 |
| scaffold1501 |
Augustus |
exon |
21677 |
21808 |
. |
- |
. |
ID=Dca11292.1.exon4;Parent=Dca11292.1 |
