Carnation DB

Dca11325.1

Annotation

6-exons
f-1
sp|B9IA44_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824237#GO:0005856;GO:0003779;GO:0030833#1F1P1C
AT2G30910.1 | Symbols: ARPC1A, ARPC1 | actin-related protein C1A | chr2:13153447-13156869 FORWARD LENGTH=378
Repeat List (scaffold1503)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11325.1	6	99	105	77.14	94	87	6e-43
Target_name	Start	End	Length	Cov(%)
sp\|B9IA44_POPTR	177	270	378	24.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11325.1	6	104	105	77.14	99	82	4e-44
Target_name	Start	End	Length	Cov(%)
AT2G30910.1	178	276	378	26.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1503	Augustus	mRNA	53525	55038	.	-	.	ID=Dca11325.1;Parent=Dca11325
scaffold1503	Augustus	exon	53525	53599	.	-	.	ID=Dca11325.1.exon1;Parent=Dca11325.1
scaffold1503	Augustus	exon	53702	53790	.	-	.	ID=Dca11325.1.exon2;Parent=Dca11325.1
scaffold1503	Augustus	exon	53933	54014	.	-	.	ID=Dca11325.1.exon3;Parent=Dca11325.1
scaffold1503	Augustus	exon	54779	54821	.	-	.	ID=Dca11325.1.exon4;Parent=Dca11325.1
scaffold1503	Augustus	exon	54910	54923	.	-	.	ID=Dca11325.1.exon5;Parent=Dca11325.1
scaffold1503	Augustus	exon	55024	55038	.	-	.	ID=Dca11325.1.exon6;Parent=Dca11325.1