Dca11389.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1508)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11389.1 |
2 |
232 |
236 |
63.98 |
231 |
59 |
9e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
1184 |
1437 |
1499 |
16.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11389.1 |
2 |
220 |
236 |
38.13 |
219 |
37 |
7e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1165 |
1410 |
1539 |
15.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1508 |
Augustus |
mRNA |
66587 |
67378 |
. |
+ |
. |
ID=Dca11389.1;Parent=Dca11389 |
| scaffold1508 |
Augustus |
exon |
66587 |
66839 |
. |
+ |
. |
ID=Dca11389.1.exon1;Parent=Dca11389.1 |
| scaffold1508 |
Augustus |
exon |
66921 |
67378 |
. |
+ |
. |
ID=Dca11389.1.exon2;Parent=Dca11389.1 |
