Carnation DB

Dca11417.1

Annotation

5-exons
f-277
sp|A2YT50_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_28496#GO:0016021#0F0P1C
Os08t0260600-01 Tetraspanin domain containing protein.
Repeat List (scaffold151)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11417.1	2	142	142	37.32	141	38	3e-26
Target_name	Start	End	Length	Cov(%)
sp\|A2YT50_ORYSI	124	261	273	50.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11417.1	2	142	142	36.61	141	37	7e-27
Target_name	Start	End	Length	Cov(%)
Os08t0260600-01	124	261	274	50.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold151	Augustus	mRNA	4553	6948	.	-	.	ID=Dca11417.1;Parent=Dca11417
scaffold151	Augustus	exon	4553	4822	.	-	.	ID=Dca11417.1.exon1;Parent=Dca11417.1
scaffold151	Augustus	exon	4953	5166	.	-	.	ID=Dca11417.1.exon2;Parent=Dca11417.1
scaffold151	Augustus	exon	6360	6412	.	-	.	ID=Dca11417.1.exon3;Parent=Dca11417.1
scaffold151	Augustus	exon	6704	6821	.	-	.	ID=Dca11417.1.exon4;Parent=Dca11417.1
scaffold151	Augustus	exon	6899	6948	.	-	.	ID=Dca11417.1.exon5;Parent=Dca11417.1