Dca11457.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold15104)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11457.1 |
222 |
355 |
361 |
20.49 |
134 |
55 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
817 |
952 |
964 |
14.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11457.1 |
241 |
360 |
361 |
11.08 |
120 |
34 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1300 |
1418 |
1428 |
8.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15104 |
Augustus |
mRNA |
1321 |
4165 |
. |
- |
. |
ID=Dca11457.1;Parent=Dca11457 |
| scaffold15104 |
Augustus |
exon |
1321 |
1687 |
. |
- |
. |
ID=Dca11457.1.exon1;Parent=Dca11457.1 |
| scaffold15104 |
Augustus |
exon |
3344 |
3533 |
. |
- |
. |
ID=Dca11457.1.exon2;Parent=Dca11457.1 |
| scaffold15104 |
Augustus |
exon |
3637 |
4165 |
. |
- |
. |
ID=Dca11457.1.exon3;Parent=Dca11457.1 |
