Dca11475.1
Annotation
- 2-exons
- f-1
- sp|D7L3H2_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_479891#unknown#0F0P0C
- AT3G23760.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:8562965-8564640 REVERSE LENGTH=194
- Repeat List (scaffold1512)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11475.1 |
12 |
201 |
225 |
48.44 |
190 |
58 |
1e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L3H2_ARALL |
9 |
191 |
195 |
93.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11475.1 |
11 |
203 |
225 |
48.44 |
193 |
57 |
1e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G23760.1 |
9 |
192 |
194 |
94.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1512 |
Augustus |
mRNA |
41129 |
42540 |
. |
+ |
. |
ID=Dca11475.1;Parent=Dca11475 |
| scaffold1512 |
Augustus |
exon |
41129 |
41639 |
. |
+ |
. |
ID=Dca11475.1.exon1;Parent=Dca11475.1 |
| scaffold1512 |
Augus-PASA |
exon |
42374 |
42540 |
. |
+ |
. |
ID=Dca11475.1.exon2;Parent=Dca11475.1 |
