Carnation DB

Dca11523.1

Annotation

6-exons
f-1
sp|D7LGC6_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_482315#GO:0016021;GO:0008219#0F1P1C
AT2G33670.1 | Symbols: MLO5, ATMLO5 | Seven transmembrane MLO family protein | chr2:14245138-14247879 FORWARD LENGTH=501
Repeat List (scaffold1515)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11523.1	45	212	233	42.91	168	35	1e-32
Target_name	Start	End	Length	Cov(%)
sp\|D7LGC6_ARALL	138	428	499	58.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11523.1	11	42	233	8.58	32	63	4e-06
Target_name	Start	End	Length	Cov(%)
AT2G33670.1	15	46	501	6.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1515	Augustus	mRNA	136779	140972	.	-	.	ID=Dca11523.1;Parent=Dca11523
scaffold1515	Augustus	exon	136779	136914	.	-	.	ID=Dca11523.1.exon1;Parent=Dca11523.1
scaffold1515	Augustus	exon	137011	137078	.	-	.	ID=Dca11523.1.exon2;Parent=Dca11523.1
scaffold1515	Augustus	exon	137342	137515	.	-	.	ID=Dca11523.1.exon3;Parent=Dca11523.1
scaffold1515	Augustus	exon	138037	138111	.	-	.	ID=Dca11523.1.exon4;Parent=Dca11523.1
scaffold1515	Augustus	exon	139443	139559	.	-	.	ID=Dca11523.1.exon5;Parent=Dca11523.1
scaffold1515	Augustus	exon	140841	140972	.	-	.	ID=Dca11523.1.exon6;Parent=Dca11523.1