Carnation DB

Dca11686.1

Annotation

7-exons
f-1
sp|D7SN79_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0061g01020#GO:0005743;GO:0033615#0F1P1C
AT1G08220.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | chr1:2581574-2583288 REVERSE LENGTH=274
Repeat List (scaffold1523)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11686.1	30	269	269	60.96	240	69	3e-87
Target_name	Start	End	Length	Cov(%)
sp\|D7SN79_VITVI	34	272	272	87.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11686.1	36	269	269	48.69	234	55	1e-76
Target_name	Start	End	Length	Cov(%)
AT1G08220.1	37	274	274	86.86

seqname	source	feature	start	end	score	strand	frame	group
scaffold1523	Augustus	mRNA	23656	28801	.	+	.	ID=Dca11686.1;Parent=Dca11686
scaffold1523	Augustus	exon	23656	23802	.	+	.	ID=Dca11686.1.exon1;Parent=Dca11686.1
scaffold1523	Augustus	exon	23927	23967	.	+	.	ID=Dca11686.1.exon2;Parent=Dca11686.1
scaffold1523	Augustus	exon	24133	24196	.	+	.	ID=Dca11686.1.exon3;Parent=Dca11686.1
scaffold1523	Augustus	exon	25743	25931	.	+	.	ID=Dca11686.1.exon4;Parent=Dca11686.1
scaffold1523	Augus-PASA	exon	26804	26875	.	+	.	ID=Dca11686.1.exon5;Parent=Dca11686.1
scaffold1523	Augus-PASA	exon	28423	28601	.	+	.	ID=Dca11686.1.exon6;Parent=Dca11686.1
scaffold1523	Augus-PASA	exon	28684	28801	.	+	.	ID=Dca11686.1.exon7;Parent=Dca11686.1