Carnation DB

Dca11943.1

Annotation

6-exons
f-1
sp|B9MYF0_POPTR#Aminotransferase family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=AMT1#GO:0016847;GO:0030170;GO:0008483#3F0P0C
Repeat List (scaffold1539)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11943.1	1	400	413	67.55	400	67	4e-170
Target_name	Start	End	Length	Cov(%)
sp\|B9MYF0_POPTR	1	415	418	99.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11943.1	1	402	413	60.77	402	60	7e-143
Target_name	Start	End	Length	Cov(%)
AT5G53970.1	1	409	414	98.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1539	Augustus	mRNA	46636	53974	.	-	.	ID=Dca11943.1;Parent=Dca11943
scaffold1539	Augustus	exon	46636	46784	.	-	.	ID=Dca11943.1.exon1;Parent=Dca11943.1
scaffold1539	Augustus	exon	47276	47369	.	-	.	ID=Dca11943.1.exon2;Parent=Dca11943.1
scaffold1539	Augustus	exon	47621	47776	.	-	.	ID=Dca11943.1.exon3;Parent=Dca11943.1
scaffold1539	Augustus	exon	48210	48428	.	-	.	ID=Dca11943.1.exon4;Parent=Dca11943.1
scaffold1539	Augustus	exon	49053	49392	.	-	.	ID=Dca11943.1.exon5;Parent=Dca11943.1
scaffold1539	Augustus	exon	53691	53974	.	-	.	ID=Dca11943.1.exon6;Parent=Dca11943.1