Carnation DB

Dca11960.1

Annotation

6-exons
f-1
sp|B9GGY7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_550337#GO:0008299;GO:0015979#0F2P0C
sp|B9SR69_RICCO#Solanesyl diphosphate synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1182760#GO:0000010;GO:0008299;GO:0015979#1F2P0C
Repeat List (scaffold154)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11960.1	2	417	418	72.72	416	71	4e-171
Target_name	Start	End	Length	Cov(%)
sp\|B9GGY7_POPTR	1	419	420	99.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11960.1	65	418	418	65.55	354	78	3e-156
Target_name	Start	End	Length	Cov(%)
AT1G78510.1	53	406	406	87.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold154	Augustus	mRNA	161005	164386	.	+	.	ID=Dca11960.1;Parent=Dca11960
scaffold154	Augustus	exon	161005	161224	.	+	.	ID=Dca11960.1.exon1;Parent=Dca11960.1
scaffold154	Augustus	exon	161503	161630	.	+	.	ID=Dca11960.1.exon2;Parent=Dca11960.1
scaffold154	Augustus	exon	162638	162765	.	+	.	ID=Dca11960.1.exon3;Parent=Dca11960.1
scaffold154	Augustus	exon	162885	162988	.	+	.	ID=Dca11960.1.exon4;Parent=Dca11960.1
scaffold154	Augustus	exon	163405	163532	.	+	.	ID=Dca11960.1.exon5;Parent=Dca11960.1
scaffold154	Augustus	exon	163838	164386	.	+	.	ID=Dca11960.1.exon6;Parent=Dca11960.1