Carnation DB

Dca1230.1

Annotation

8-exons
f-1
sp|F6HPN2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g00220#GO:0016620#1F0P0C
Os06t0270900-01 Similar to RF2 (EC 1.2.1.3) (T cytoplasm male sterility restorer factor 2).
Repeat List (scaffold10351)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1230.1	2	414	414	79.95	413	81	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HPN2_VITVI	36	448	545	75.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1230.1	1	414	414	78.26	414	79	0
Target_name	Start	End	Length	Cov(%)
Os06t0270900-01	46	459	550	75.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10351	Augustus	mRNA	6299	8592	.	+	.	ID=Dca1230.1;Parent=Dca1230
scaffold10351	Augustus	exon	6299	6410	.	+	.	ID=Dca1230.1.exon1;Parent=Dca1230.1
scaffold10351	Augustus	exon	6501	6643	.	+	.	ID=Dca1230.1.exon2;Parent=Dca1230.1
scaffold10351	Augustus	exon	6741	6894	.	+	.	ID=Dca1230.1.exon3;Parent=Dca1230.1
scaffold10351	Augustus	exon	7061	7290	.	+	.	ID=Dca1230.1.exon4;Parent=Dca1230.1
scaffold10351	Augustus	exon	7477	7566	.	+	.	ID=Dca1230.1.exon5;Parent=Dca1230.1
scaffold10351	Augustus	exon	7847	8020	.	+	.	ID=Dca1230.1.exon6;Parent=Dca1230.1
scaffold10351	Augustus	exon	8110	8247	.	+	.	ID=Dca1230.1.exon7;Parent=Dca1230.1
scaffold10351	Augustus	exon	8389	8592	.	+	.	ID=Dca1230.1.exon8;Parent=Dca1230.1