Dca12424.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15688)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12424.1 |
47 |
466 |
468 |
36.75 |
420 |
38 |
2e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
23 |
474 |
1501 |
30.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12424.1 |
60 |
235 |
468 |
11.75 |
176 |
32 |
4e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
255 |
296 |
59.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15688 |
Augustus |
mRNA |
1 |
2656 |
. |
- |
. |
ID=Dca12424.1;Parent=Dca12424 |
| scaffold15688 |
Augustus |
exon |
1 |
1262 |
. |
- |
. |
ID=Dca12424.1.exon1;Parent=Dca12424.1 |
| scaffold15688 |
Augustus |
exon |
2416 |
2532 |
. |
- |
. |
ID=Dca12424.1.exon2;Parent=Dca12424.1 |
| scaffold15688 |
Augustus |
exon |
2632 |
2656 |
. |
- |
. |
ID=Dca12424.1.exon3;Parent=Dca12424.1 |
