Carnation DB

Dca12440.1

Annotation

13-exons
f-1
sp|B9I3Y1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_773250#GO:0016779;GO:0003723;GO:0006396#2F1P0C
sp|B9RA84_RICCO#Poly(A) polymerase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1504220#GO:0004652;GO:0003723;GO:0006396#2F1P0C
Repeat List (scaffold157)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12440.1	3	520	520	57.3	518	57	9e-177
Target_name	Start	End	Length	Cov(%)
sp\|B9I3Y1_POPTR	1	514	515	99.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12440.1	3	520	520	55	518	55	5e-164
Target_name	Start	End	Length	Cov(%)
AT5G23690.1	1	521	527	98.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold157	Augustus	mRNA	32293	36762	.	+	.	ID=Dca12440.1;Parent=Dca12440
scaffold157	Augustus	exon	32293	32485	.	+	.	ID=Dca12440.1.exon1;Parent=Dca12440.1
scaffold157	Augustus	exon	32644	32736	.	+	.	ID=Dca12440.1.exon2;Parent=Dca12440.1
scaffold157	Augustus	exon	33404	33501	.	+	.	ID=Dca12440.1.exon3;Parent=Dca12440.1
scaffold157	Augustus	exon	33623	33706	.	+	.	ID=Dca12440.1.exon4;Parent=Dca12440.1
scaffold157	Augustus	exon	33891	34024	.	+	.	ID=Dca12440.1.exon5;Parent=Dca12440.1
scaffold157	Augustus	exon	34164	34236	.	+	.	ID=Dca12440.1.exon6;Parent=Dca12440.1
scaffold157	Augustus	exon	34312	34357	.	+	.	ID=Dca12440.1.exon7;Parent=Dca12440.1
scaffold157	Augustus	exon	34742	34851	.	+	.	ID=Dca12440.1.exon8;Parent=Dca12440.1
scaffold157	Augustus	exon	34936	35043	.	+	.	ID=Dca12440.1.exon9;Parent=Dca12440.1
scaffold157	Augustus	exon	35133	35192	.	+	.	ID=Dca12440.1.exon10;Parent=Dca12440.1
scaffold157	Augustus	exon	35419	35480	.	+	.	ID=Dca12440.1.exon11;Parent=Dca12440.1
scaffold157	Augustus	exon	35905	36217	.	+	.	ID=Dca12440.1.exon12;Parent=Dca12440.1
scaffold157	Augustus	exon	36574	36762	.	+	.	ID=Dca12440.1.exon13;Parent=Dca12440.1