Carnation DB

Dca1261.1

Annotation

9-exons
f-1
sp|F6HFG1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g05300#GO:0005488#1F0P0C
AT1G23180.1 | Symbols: | ARM repeat superfamily protein | chr1:8216125-8219515 FORWARD LENGTH=834
Repeat List (scaffold1037)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1261.1	52	856	857	56.35	805	59	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HFG1_VITVI	56	879	880	93.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1261.1	98	857	857	47.25	760	53	0
Target_name	Start	End	Length	Cov(%)
AT1G23180.1	86	834	834	89.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1037	Augustus	mRNA	6083	15029	.	+	.	ID=Dca1261.1;Parent=Dca1261
scaffold1037	Augustus	exon	6083	6337	.	+	.	ID=Dca1261.1.exon1;Parent=Dca1261.1
scaffold1037	Augustus	exon	7154	7555	.	+	.	ID=Dca1261.1.exon2;Parent=Dca1261.1
scaffold1037	Augustus	exon	8011	8226	.	+	.	ID=Dca1261.1.exon3;Parent=Dca1261.1
scaffold1037	Augustus	exon	9143	9792	.	+	.	ID=Dca1261.1.exon4;Parent=Dca1261.1
scaffold1037	Augustus	exon	11476	11572	.	+	.	ID=Dca1261.1.exon5;Parent=Dca1261.1
scaffold1037	Augustus	exon	11655	11708	.	+	.	ID=Dca1261.1.exon6;Parent=Dca1261.1
scaffold1037	Augustus	exon	11812	11903	.	+	.	ID=Dca1261.1.exon7;Parent=Dca1261.1
scaffold1037	Augustus	exon	12739	12929	.	+	.	ID=Dca1261.1.exon8;Parent=Dca1261.1
scaffold1037	Augustus	exon	14413	15029	.	+	.	ID=Dca1261.1.exon9;Parent=Dca1261.1