Carnation DB

Dca12644.1

Annotation

8-exons
f-1
sp|A5BQ62_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040310#GO:0003676;GO:0015074#1F1P0C
AT1G02330.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink). | chr1:462202-463521 REVERSE LENGTH=279
Repeat List (scaffold158)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12644.1	248	595	596	35.57	348	56	1e-112
Target_name	Start	End	Length	Cov(%)
sp\|A5BQ62_VITVI	1085	1460	1461	25.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12644.1	1	266	596	28.35	266	61	9e-80
Target_name	Start	End	Length	Cov(%)
AT1G02330.1	1	278	279	99.64

seqname	source	feature	start	end	score	strand	frame	group
scaffold158	Augustus	mRNA	297545	303907	.	+	.	ID=Dca12644.1;Parent=Dca12644
scaffold158	Augustus	exon	297545	297624	.	+	.	ID=Dca12644.1.exon1;Parent=Dca12644.1
scaffold158	Augus-PASA	exon	297797	298000	.	+	.	ID=Dca12644.1.exon2;Parent=Dca12644.1
scaffold158	Augus-PASA	exon	298320	298443	.	+	.	ID=Dca12644.1.exon3;Parent=Dca12644.1
scaffold158	Augus-PASA	exon	300344	300417	.	+	.	ID=Dca12644.1.exon4;Parent=Dca12644.1
scaffold158	Augus-PASA	exon	300523	300680	.	+	.	ID=Dca12644.1.exon5;Parent=Dca12644.1
scaffold158	Augustus	exon	300926	301074	.	+	.	ID=Dca12644.1.exon6;Parent=Dca12644.1
scaffold158	Augustus	exon	302829	303554	.	+	.	ID=Dca12644.1.exon7;Parent=Dca12644.1
scaffold158	Augustus	exon	303632	303907	.	+	.	ID=Dca12644.1.exon8;Parent=Dca12644.1