Dca12743.1
Annotation
- 4-exons
- f-1
- sp|Q84MG2_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g30990, Os03g30990#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1586)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12743.1 |
9 |
541 |
562 |
40.03 |
533 |
38 |
6e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q84MG2_ORYSJ |
749 |
1342 |
1547 |
38.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1586 |
Augustus |
mRNA |
10636 |
12804 |
. |
+ |
. |
ID=Dca12743.1;Parent=Dca12743 |
| scaffold1586 |
Augustus |
exon |
10636 |
10710 |
. |
+ |
. |
ID=Dca12743.1.exon1;Parent=Dca12743.1 |
| scaffold1586 |
Augustus |
exon |
10933 |
11381 |
. |
+ |
. |
ID=Dca12743.1.exon2;Parent=Dca12743.1 |
| scaffold1586 |
Augustus |
exon |
11553 |
12345 |
. |
+ |
. |
ID=Dca12743.1.exon3;Parent=Dca12743.1 |
| scaffold1586 |
Augustus |
exon |
12433 |
12804 |
. |
+ |
. |
ID=Dca12743.1.exon4;Parent=Dca12743.1 |
