Carnation DB

Dca12770.1

Annotation

6-exons
f-1
sp|G3LUH8_CITSI#Poly(A)-binding protein 1#Citrus sinensis (Sweet orange) (Citrus aurantium var sinensis)#unknown#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold1588)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12770.1	2	215	215	68.83	214	69	4e-80
Target_name	Start	End	Length	Cov(%)
sp\|G3LUH8_CITSI	30	234	234	87.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12770.1	6	215	215	67.44	210	64	6e-70
Target_name	Start	End	Length	Cov(%)
AT5G65260.1	1	219	220	99.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1588	Augus-PASA	mRNA	44944	48930	.	+	.	ID=Dca12770.1;Parent=Dca12770
scaffold1588	Augus-PASA	exon	44944	45054	.	+	.	ID=Dca12770.1.exon1;Parent=Dca12770.1
scaffold1588	Augus-PASA	exon	45141	45243	.	+	.	ID=Dca12770.1.exon2;Parent=Dca12770.1
scaffold1588	Augus-PASA	exon	46312	46382	.	+	.	ID=Dca12770.1.exon3;Parent=Dca12770.1
scaffold1588	Augus-PASA	exon	47376	47567	.	+	.	ID=Dca12770.1.exon4;Parent=Dca12770.1
scaffold1588	Augus-PASA	exon	47963	48090	.	+	.	ID=Dca12770.1.exon5;Parent=Dca12770.1
scaffold1588	Augus-PASA	exon	48888	48930	.	+	.	ID=Dca12770.1.exon6;Parent=Dca12770.1