Carnation DB

Dca12776.1

Annotation

5-exons
f-1
sp|B9IQB1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_738750#unknown#0F0P0C
AT1G71480.1 | Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr1:26932079-26933086 FORWARD LENGTH=216
Repeat List (scaffold15888)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12776.1	63	231	231	53.67	169	72	1e-66
Target_name	Start	End	Length	Cov(%)
sp\|B9IQB1_POPTR	2	164	164	99.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12776.1	85	231	231	48.05	147	76	2e-64
Target_name	Start	End	Length	Cov(%)
AT1G71480.1	70	216	216	68.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15888	Augustus	mRNA	6143	7546	.	+	.	ID=Dca12776.1;Parent=Dca12776
scaffold15888	Augustus	exon	6143	6526	.	+	.	ID=Dca12776.1.exon1;Parent=Dca12776.1
scaffold15888	Augustus	exon	6968	7082	.	+	.	ID=Dca12776.1.exon2;Parent=Dca12776.1
scaffold15888	Augustus	exon	7166	7247	.	+	.	ID=Dca12776.1.exon3;Parent=Dca12776.1
scaffold15888	Augustus	exon	7324	7375	.	+	.	ID=Dca12776.1.exon4;Parent=Dca12776.1
scaffold15888	Augustus	exon	7484	7546	.	+	.	ID=Dca12776.1.exon5;Parent=Dca12776.1