Dca12862.1
Annotation
- 4-exons
- f-1
- sp|B9GLX7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_639801#GO:0005789;GO:0016021;GO:0016758;GO:0006506#1F1P2C
- sp|Q0WVX1_ARATH#At5g22130#Arabidopsis thaliana (Mouse-ear cress)#Name=At5g22130#GO:0005789;GO:0016021;GO:0016758;GO:0006506#1F1P2C
- Repeat List (scaffold1593)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12862.1 |
1 |
368 |
390 |
57.17 |
368 |
61 |
6e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GLX7_POPTR |
10 |
334 |
342 |
95.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12862.1 |
1 |
367 |
390 |
57.94 |
367 |
58 |
1e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G22130.2 |
22 |
366 |
470 |
73.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1593 |
Augustus |
mRNA |
37734 |
39867 |
. |
- |
. |
ID=Dca12862.1;Parent=Dca12862 |
| scaffold1593 |
Augustus |
exon |
37734 |
38347 |
. |
- |
. |
ID=Dca12862.1.exon1;Parent=Dca12862.1 |
| scaffold1593 |
Augustus |
exon |
38668 |
38799 |
. |
- |
. |
ID=Dca12862.1.exon2;Parent=Dca12862.1 |
| scaffold1593 |
Augustus |
exon |
38915 |
39097 |
. |
- |
. |
ID=Dca12862.1.exon3;Parent=Dca12862.1 |
| scaffold1593 |
Augustus |
exon |
39624 |
39867 |
. |
- |
. |
ID=Dca12862.1.exon4;Parent=Dca12862.1 |
