Dca12917.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold15974)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12917.1 |
1 |
543 |
883 |
28.53 |
543 |
46 |
1e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
162 |
654 |
1717 |
28.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12917.1 |
356 |
483 |
883 |
4.75 |
128 |
33 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
64 |
189 |
192 |
65.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15974 |
Augustus |
mRNA |
670 |
8616 |
. |
- |
. |
ID=Dca12917.1;Parent=Dca12917 |
| scaffold15974 |
Augustus |
exon |
670 |
822 |
. |
- |
. |
ID=Dca12917.1.exon1;Parent=Dca12917.1 |
| scaffold15974 |
Augustus |
exon |
910 |
1014 |
. |
- |
. |
ID=Dca12917.1.exon2;Parent=Dca12917.1 |
| scaffold15974 |
Augustus |
exon |
2218 |
2981 |
. |
- |
. |
ID=Dca12917.1.exon3;Parent=Dca12917.1 |
| scaffold15974 |
Augustus |
exon |
6990 |
8616 |
. |
- |
. |
ID=Dca12917.1.exon4;Parent=Dca12917.1 |
