Dca12920.1
Annotation
- 3-exons
- f-1
- sp|O49140_ARATH#Polyprotein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1598)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12920.1 |
1 |
47 |
690 |
4.05 |
47 |
60 |
5e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O49140_ARATH |
1383 |
1429 |
1451 |
3.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12920.1 |
1 |
47 |
690 |
3.47 |
47 |
52 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1330 |
1376 |
1401 |
3.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1598 |
Augustus |
mRNA |
4464 |
7340 |
. |
+ |
. |
ID=Dca12920.1;Parent=Dca12920 |
| scaffold1598 |
Augustus |
exon |
4464 |
4605 |
. |
+ |
. |
ID=Dca12920.1.exon1;Parent=Dca12920.1 |
| scaffold1598 |
Augustus |
exon |
5254 |
6450 |
. |
+ |
. |
ID=Dca12920.1.exon2;Parent=Dca12920.1 |
| scaffold1598 |
Augustus |
exon |
6607 |
7340 |
. |
+ |
. |
ID=Dca12920.1.exon3;Parent=Dca12920.1 |
