Dca12934.1
Annotation
- 3-exons
- f-2
- sp|B9H5M5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558645#unknown#0F0P0C
- Os03t0851300-03 Winged helix repressor DNA-binding domain containing protein.
- Repeat List (scaffold15991)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12934.1 |
1 |
104 |
114 |
78.94 |
104 |
87 |
5e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H5M5_POPTR |
223 |
326 |
442 |
23.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12934.1 |
1 |
104 |
114 |
72.8 |
104 |
80 |
5e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0851300-03 |
224 |
327 |
444 |
23.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15991 |
Augustus |
mRNA |
2684 |
3205 |
. |
+ |
. |
ID=Dca12934.1;Parent=Dca12934 |
| scaffold15991 |
Augustus |
exon |
2684 |
2783 |
. |
+ |
. |
ID=Dca12934.1.exon1;Parent=Dca12934.1 |
| scaffold15991 |
Augustus |
exon |
2863 |
2975 |
. |
+ |
. |
ID=Dca12934.1.exon2;Parent=Dca12934.1 |
| scaffold15991 |
Augustus |
exon |
3073 |
3205 |
. |
+ |
. |
ID=Dca12934.1.exon3;Parent=Dca12934.1 |
