Carnation DB

Dca12957.1

Annotation

7-exons
f-1
sp|D7SZK0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g01410#GO:0016021#0F0P1C
sp|B9HSH0_POPTR#Pho1-like protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_229802#GO:0016021#0F0P1C
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12957.1	3	106	444	13.96	104	60	7e-31
Target_name	Start	End	Length	Cov(%)
sp\|D7SZK0_VITVI	211	314	797	13.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12957.1	3	103	444	9.9	101	42	5e-17
Target_name	Start	End	Length	Cov(%)
AT3G23430.1	194	296	782	13.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	152866	157729	.	-	.	ID=Dca12957.1;Parent=Dca12957
scaffold16	Augustus	exon	152866	152956	.	-	.	ID=Dca12957.1.exon1;Parent=Dca12957.1
scaffold16	Augustus	exon	153086	153225	.	-	.	ID=Dca12957.1.exon2;Parent=Dca12957.1
scaffold16	Augustus	exon	153321	153605	.	-	.	ID=Dca12957.1.exon3;Parent=Dca12957.1
scaffold16	Augustus	exon	153724	153876	.	-	.	ID=Dca12957.1.exon4;Parent=Dca12957.1
scaffold16	Augustus	exon	154329	154578	.	-	.	ID=Dca12957.1.exon5;Parent=Dca12957.1
scaffold16	Augustus	exon	154685	154811	.	-	.	ID=Dca12957.1.exon6;Parent=Dca12957.1
scaffold16	Augustus	exon	157441	157729	.	-	.	ID=Dca12957.1.exon7;Parent=Dca12957.1