Carnation DB

Dca12961.1

Annotation

7-exons
f-1
sp|F6H8J3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g01490#GO:0003676;GO:0000166#2F0P0C
AT2G33435.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:14166037-14169492 FORWARD LENGTH=979
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12961.1	1	124	980	4.38	124	33	3e-06
Target_name	Start	End	Length	Cov(%)
sp\|F6H8J3_VITVI	46	178	981	13.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12961.1	372	698	980	14.48	327	43	3e-55
Target_name	Start	End	Length	Cov(%)
AT2G33435.1	649	969	979	32.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	184793	191367	.	-	.	ID=Dca12961.1;Parent=Dca12961
scaffold16	Augustus	exon	184793	185249	.	-	.	ID=Dca12961.1.exon1;Parent=Dca12961.1
scaffold16	Augustus	exon	185807	185886	.	-	.	ID=Dca12961.1.exon2;Parent=Dca12961.1
scaffold16	Augustus	exon	185984	186076	.	-	.	ID=Dca12961.1.exon3;Parent=Dca12961.1
scaffold16	Augustus	exon	186232	186339	.	-	.	ID=Dca12961.1.exon4;Parent=Dca12961.1
scaffold16	Augustus	exon	187192	187311	.	-	.	ID=Dca12961.1.exon5;Parent=Dca12961.1
scaffold16	Augustus	exon	189174	189311	.	-	.	ID=Dca12961.1.exon6;Parent=Dca12961.1
scaffold16	Augustus	exon	189421	191367	.	-	.	ID=Dca12961.1.exon7;Parent=Dca12961.1