Carnation DB

Dca12970.1

Annotation

18-exons
f-1
sp|D7SZN5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g01840#GO:0000151;GO:0004842#1F0P1C
Os10t0466300-02 Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12970.1	1	524	524	79.58	524	80	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SZN5_VITVI	1	524	524	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12970.1	1	519	524	73.09	519	74	0
Target_name	Start	End	Length	Cov(%)
Os10t0466300-02	1	516	528	97.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augus-PASA	mRNA	233900	240905	.	+	.	ID=Dca12970.1;Parent=Dca12970
scaffold16	Augus-PASA	exon	233900	233912	.	+	.	ID=Dca12970.1.exon1;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	234212	234297	.	+	.	ID=Dca12970.1.exon2;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	235342	235413	.	+	.	ID=Dca12970.1.exon3;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	235511	235573	.	+	.	ID=Dca12970.1.exon4;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	236766	236852	.	+	.	ID=Dca12970.1.exon5;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	236968	237112	.	+	.	ID=Dca12970.1.exon6;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	237226	237347	.	+	.	ID=Dca12970.1.exon7;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	237578	237694	.	+	.	ID=Dca12970.1.exon8;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	237927	238022	.	+	.	ID=Dca12970.1.exon9;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	238109	238171	.	+	.	ID=Dca12970.1.exon10;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	238661	238735	.	+	.	ID=Dca12970.1.exon11;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	239171	239275	.	+	.	ID=Dca12970.1.exon12;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	239373	239489	.	+	.	ID=Dca12970.1.exon13;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	239591	239668	.	+	.	ID=Dca12970.1.exon14;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	239763	239859	.	+	.	ID=Dca12970.1.exon15;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	239983	240034	.	+	.	ID=Dca12970.1.exon16;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	240226	240296	.	+	.	ID=Dca12970.1.exon17;Parent=Dca12970.1
scaffold16	Augus-PASA	exon	240790	240905	.	+	.	ID=Dca12970.1.exon18;Parent=Dca12970.1