Carnation DB

Dca13000.1

Annotation

7-exons
f-1
sp|D7SHA6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g10240#GO:0008234;GO:0006508#1F1P0C
AT3G48480.1 | Symbols: | Cysteine proteinases superfamily protein | chr3:17957326-17959062 REVERSE LENGTH=298
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13000.1	27	302	334	47.3	276	57	2e-80
Target_name	Start	End	Length	Cov(%)
sp\|D7SHA6_VITVI	27	288	295	88.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13000.1	6	301	334	38.32	296	43	2e-55
Target_name	Start	End	Length	Cov(%)
AT3G48480.1	15	291	298	92.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	473489	476291	.	+	.	ID=Dca13000.1;Parent=Dca13000
scaffold16	Augustus	exon	473489	473546	.	+	.	ID=Dca13000.1.exon1;Parent=Dca13000.1
scaffold16	Augustus	exon	474444	474747	.	+	.	ID=Dca13000.1.exon2;Parent=Dca13000.1
scaffold16	Augustus	exon	474828	474995	.	+	.	ID=Dca13000.1.exon3;Parent=Dca13000.1
scaffold16	Augustus	exon	475112	475234	.	+	.	ID=Dca13000.1.exon4;Parent=Dca13000.1
scaffold16	Augustus	exon	475525	475606	.	+	.	ID=Dca13000.1.exon5;Parent=Dca13000.1
scaffold16	Augustus	exon	475942	476055	.	+	.	ID=Dca13000.1.exon6;Parent=Dca13000.1
scaffold16	Augustus	exon	476136	476291	.	+	.	ID=Dca13000.1.exon7;Parent=Dca13000.1