Carnation DB

Dca13015.1

Annotation

5-exons
f-1
sp|B9GPM7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_753848#GO:0016021;GO:0055085#0F1P1C
AT1G76520.1 | Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390
Repeat List (scaffold160)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13015.1	6	229	229	53.27	224	50	3e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9GPM7_POPTR	170	407	407	58.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13015.1	20	229	229	48.47	210	49	2e-54
Target_name	Start	End	Length	Cov(%)
AT1G76520.1	172	390	390	56.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold160	Augustus	mRNA	35139	37635	.	+	.	ID=Dca13015.1;Parent=Dca13015
scaffold160	Augustus	exon	35139	35339	.	+	.	ID=Dca13015.1.exon1;Parent=Dca13015.1
scaffold160	Augustus	exon	36544	36644	.	+	.	ID=Dca13015.1.exon2;Parent=Dca13015.1
scaffold160	Augustus	exon	37005	37057	.	+	.	ID=Dca13015.1.exon3;Parent=Dca13015.1
scaffold160	Augustus	exon	37220	37405	.	+	.	ID=Dca13015.1.exon4;Parent=Dca13015.1
scaffold160	Augustus	exon	37487	37635	.	+	.	ID=Dca13015.1.exon5;Parent=Dca13015.1