Carnation DB

Dca13021.1

Annotation

8-exons
f-1
sp|A9PJ87_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#GO:0005634;GO:0003676;GO:0008270#2F0P1C
sp|B9S791_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0774560#GO:0005634;GO:0003676;GO:0008270#2F0P1C
Repeat List (scaffold160)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13021.1	176	420	422	36.49	245	62	1e-80
Target_name	Start	End	Length	Cov(%)
sp\|A9PJ87_9ROSI	1	248	250	99.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13021.1	176	420	422	34.59	245	58	3e-77
Target_name	Start	End	Length	Cov(%)
Os06t0215200-01	1	240	244	98.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold160	Augustus	mRNA	72301	78996	.	-	.	ID=Dca13021.1;Parent=Dca13021
scaffold160	Augustus	exon	72301	72647	.	-	.	ID=Dca13021.1.exon1;Parent=Dca13021.1
scaffold160	Augustus	exon	72770	72865	.	-	.	ID=Dca13021.1.exon2;Parent=Dca13021.1
scaffold160	Augustus	exon	75507	75597	.	-	.	ID=Dca13021.1.exon3;Parent=Dca13021.1
scaffold160	Augustus	exon	75715	75915	.	-	.	ID=Dca13021.1.exon4;Parent=Dca13021.1
scaffold160	Augustus	exon	76065	76139	.	-	.	ID=Dca13021.1.exon5;Parent=Dca13021.1
scaffold160	Augustus	exon	76953	77075	.	-	.	ID=Dca13021.1.exon6;Parent=Dca13021.1
scaffold160	Augustus	exon	78001	78249	.	-	.	ID=Dca13021.1.exon7;Parent=Dca13021.1
scaffold160	Augustus	exon	78910	78996	.	-	.	ID=Dca13021.1.exon8;Parent=Dca13021.1