Dca13050.1
Annotation
- 2-exons
- f-478
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold16000)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13050.1 |
1 |
63 |
63 |
63.49 |
63 |
64 |
8e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
254 |
316 |
964 |
6.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13050.1 |
1 |
63 |
63 |
46.03 |
63 |
46 |
4e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
668 |
731 |
1428 |
4.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16000 |
Augustus |
mRNA |
4930 |
6485 |
. |
- |
. |
ID=Dca13050.1;Parent=Dca13050 |
| scaffold16000 |
Augustus |
exon |
4930 |
5278 |
. |
- |
. |
ID=Dca13050.1.exon1;Parent=Dca13050.1 |
| scaffold16000 |
Augustus |
exon |
6166 |
6485 |
. |
- |
. |
ID=Dca13050.1.exon2;Parent=Dca13050.1 |
