Carnation DB

Dca13179.1

Annotation

7-exons
f-1
sp|D7TH75_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02250#unknown#0F0P0C
AT5G01470.2 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:190953-192462 FORWARD LENGTH=245
Repeat List (scaffold161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13179.1	1	240	248	69.75	240	71	5e-98
Target_name	Start	End	Length	Cov(%)
sp\|D7TH75_VITVI	1	243	262	92.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13179.1	1	239	248	67.74	239	70	2e-91
Target_name	Start	End	Length	Cov(%)
AT5G01470.2	1	238	245	97.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold161	Augustus	mRNA	36236	39422	.	-	.	ID=Dca13179.1;Parent=Dca13179
scaffold161	Augustus	exon	36236	36396	.	-	.	ID=Dca13179.1.exon1;Parent=Dca13179.1
scaffold161	Augus-PASA	exon	36497	36601	.	-	.	ID=Dca13179.1.exon2;Parent=Dca13179.1
scaffold161	Augus-PASA	exon	37098	37169	.	-	.	ID=Dca13179.1.exon3;Parent=Dca13179.1
scaffold161	Augus-PASA	exon	37468	37613	.	-	.	ID=Dca13179.1.exon4;Parent=Dca13179.1
scaffold161	Augus-PASA	exon	38412	38545	.	-	.	ID=Dca13179.1.exon5;Parent=Dca13179.1
scaffold161	Augus-PASA	exon	39166	39239	.	-	.	ID=Dca13179.1.exon6;Parent=Dca13179.1
scaffold161	Augus-PASA	exon	39368	39422	.	-	.	ID=Dca13179.1.exon7;Parent=Dca13179.1