Carnation DB

Dca1319.1

Annotation

5-exons
f-1
sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold10388)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

No data

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1319.1	459	522	734	2.72	64	32	6e-06
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	160	192	32.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10388	Augustus	mRNA	6826	9543	.	+	.	ID=Dca1319.1;Parent=Dca1319
scaffold10388	Augustus	exon	6826	7517	.	+	.	ID=Dca1319.1.exon1;Parent=Dca1319.1
scaffold10388	Augustus	exon	7655	7910	.	+	.	ID=Dca1319.1.exon2;Parent=Dca1319.1
scaffold10388	Augustus	exon	8006	8215	.	+	.	ID=Dca1319.1.exon3;Parent=Dca1319.1
scaffold10388	Augustus	exon	8315	8750	.	+	.	ID=Dca1319.1.exon4;Parent=Dca1319.1
scaffold10388	Augustus	exon	8933	9543	.	+	.	ID=Dca1319.1.exon5;Parent=Dca1319.1