Dca13311.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold16180)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13311.1 |
2 |
633 |
701 |
43.65 |
632 |
48 |
9e-146
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
229 |
767 |
1717 |
31.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13311.1 |
282 |
409 |
701 |
5.84 |
128 |
33 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
63 |
189 |
192 |
66.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16180 |
Augustus |
mRNA |
293 |
2483 |
. |
+ |
. |
ID=Dca13311.1;Parent=Dca13311 |
| scaffold16180 |
Augustus |
exon |
293 |
1820 |
. |
+ |
. |
ID=Dca13311.1.exon1;Parent=Dca13311.1 |
| scaffold16180 |
Augustus |
exon |
1906 |
2483 |
. |
+ |
. |
ID=Dca13311.1.exon2;Parent=Dca13311.1 |
