Dca13438.1
Annotation
- 2-exons
- f-1
- sp|D3IVS1_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1625)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13438.1 |
1 |
166 |
166 |
57.83 |
166 |
53 |
8e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVS1_9POAL |
58 |
238 |
566 |
31.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13438.1 |
98 |
166 |
166 |
15.66 |
69 |
38 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
584 |
652 |
1428 |
4.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1625 |
Augustus |
mRNA |
1546 |
3143 |
. |
- |
. |
ID=Dca13438.1;Parent=Dca13438 |
| scaffold1625 |
Augustus |
exon |
1546 |
1750 |
. |
- |
. |
ID=Dca13438.1.exon1;Parent=Dca13438.1 |
| scaffold1625 |
Augustus |
exon |
2848 |
3143 |
. |
- |
. |
ID=Dca13438.1.exon2;Parent=Dca13438.1 |
