Dca13499.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold16294)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13499.1 |
1 |
180 |
180 |
66.11 |
180 |
56 |
1e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
88 |
301 |
964 |
22.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13499.1 |
1 |
180 |
180 |
40 |
180 |
34 |
8e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
499 |
716 |
1428 |
15.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16294 |
Augustus |
mRNA |
1 |
644 |
. |
- |
. |
ID=Dca13499.1;Parent=Dca13499 |
| scaffold16294 |
Augustus |
exon |
1 |
79 |
. |
- |
. |
ID=Dca13499.1.exon1;Parent=Dca13499.1 |
| scaffold16294 |
Augustus |
exon |
182 |
644 |
. |
- |
. |
ID=Dca13499.1.exon2;Parent=Dca13499.1 |
