Carnation DB

Dca13509.1

Annotation

9-exons
f-1
sp|E0CRH3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g04970#GO:0005622;GO:0005525;GO:0003924;GO:0006400#2F1P1C
sp|B9RJF9_RICCO#Gtpase mss1/trme, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1033960#GO:0005622;GO:0005525;GO:0003924;GO:0006400#2F1P1C
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13509.1	24	559	559	64.93	536	65	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CRH3_VITVI	43	571	571	92.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13509.1	58	559	559	58.49	502	61	5e-173
Target_name	Start	End	Length	Cov(%)
AT1G78010.1	56	560	560	90.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augustus	mRNA	59538	66842	.	-	.	ID=Dca13509.1;Parent=Dca13509
scaffold163	Augustus	exon	59538	59732	.	-	.	ID=Dca13509.1.exon1;Parent=Dca13509.1
scaffold163	Augustus	exon	60937	61188	.	-	.	ID=Dca13509.1.exon2;Parent=Dca13509.1
scaffold163	Augustus	exon	61321	61439	.	-	.	ID=Dca13509.1.exon3;Parent=Dca13509.1
scaffold163	Augustus	exon	61761	61899	.	-	.	ID=Dca13509.1.exon4;Parent=Dca13509.1
scaffold163	Augustus	exon	64323	64555	.	-	.	ID=Dca13509.1.exon5;Parent=Dca13509.1
scaffold163	Augustus	exon	64623	64736	.	-	.	ID=Dca13509.1.exon6;Parent=Dca13509.1
scaffold163	Augustus	exon	65238	65376	.	-	.	ID=Dca13509.1.exon7;Parent=Dca13509.1
scaffold163	Augustus	exon	66089	66396	.	-	.	ID=Dca13509.1.exon8;Parent=Dca13509.1
scaffold163	Augustus	exon	66662	66842	.	-	.	ID=Dca13509.1.exon9;Parent=Dca13509.1