Carnation DB

Dca13510.1

Annotation

8-exons
f-1
sp|B9IHG8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_667207#GO:0032040;GO:0006364#0F1P1C
sp|B9RV90_RICCO#U3 small nucleolar RNA-associated protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0901060#GO:0032040;GO:0006364#0F1P1C
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13510.1	1	238	238	70.58	238	71	7e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9IHG8_POPTR	1	229	229	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13510.1	1	238	238	59.66	238	60	2e-77
Target_name	Start	End	Length	Cov(%)
Os01t0810000-02	1	229	230	99.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augustus	mRNA	68114	71389	.	+	.	ID=Dca13510.1;Parent=Dca13510
scaffold163	Augustus	exon	68114	68169	.	+	.	ID=Dca13510.1.exon1;Parent=Dca13510.1
scaffold163	Augustus	exon	68665	68755	.	+	.	ID=Dca13510.1.exon2;Parent=Dca13510.1
scaffold163	Augustus	exon	69031	69122	.	+	.	ID=Dca13510.1.exon3;Parent=Dca13510.1
scaffold163	Augustus	exon	69243	69363	.	+	.	ID=Dca13510.1.exon4;Parent=Dca13510.1
scaffold163	Augustus	exon	69473	69552	.	+	.	ID=Dca13510.1.exon5;Parent=Dca13510.1
scaffold163	Augustus	exon	69664	69747	.	+	.	ID=Dca13510.1.exon6;Parent=Dca13510.1
scaffold163	Augustus	exon	70819	70918	.	+	.	ID=Dca13510.1.exon7;Parent=Dca13510.1
scaffold163	Augustus	exon	71297	71389	.	+	.	ID=Dca13510.1.exon8;Parent=Dca13510.1
scaffold163	Augustus	mRNA	68114	71389	.	+	.	ID=Dca13510.2;Parent=Dca13510
scaffold163	Augustus	exon	68114	68169	.	+	.	ID=Dca13510.2.exon1;Parent=Dca13510.2
scaffold163	Augustus	exon	68665	68755	.	+	.	ID=Dca13510.2.exon2;Parent=Dca13510.2
scaffold163	Augustus	exon	69031	69122	.	+	.	ID=Dca13510.2.exon3;Parent=Dca13510.2
scaffold163	Augustus	exon	69243	69363	.	+	.	ID=Dca13510.2.exon4;Parent=Dca13510.2
scaffold163	Augustus	exon	69473	69552	.	+	.	ID=Dca13510.2.exon5;Parent=Dca13510.2
scaffold163	Augustus	exon	70819	70918	.	+	.	ID=Dca13510.2.exon6;Parent=Dca13510.2
scaffold163	Augustus	exon	71297	71389	.	+	.	ID=Dca13510.2.exon7;Parent=Dca13510.2