Dca13796.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1644)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13796.1 |
17 |
340 |
478 |
25.31 |
324 |
34 |
7e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
6 |
363 |
1501 |
23.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13796.1 |
39 |
214 |
478 |
11.29 |
176 |
31 |
6e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
255 |
296 |
59.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1644 |
Augustus |
mRNA |
475 |
3763 |
. |
- |
. |
ID=Dca13796.1;Parent=Dca13796 |
| scaffold1644 |
Augustus |
exon |
475 |
714 |
. |
- |
. |
ID=Dca13796.1.exon1;Parent=Dca13796.1 |
| scaffold1644 |
Augustus |
exon |
930 |
990 |
. |
- |
. |
ID=Dca13796.1.exon2;Parent=Dca13796.1 |
| scaffold1644 |
Augustus |
exon |
1930 |
2044 |
. |
- |
. |
ID=Dca13796.1.exon3;Parent=Dca13796.1 |
| scaffold1644 |
Augustus |
exon |
2743 |
3763 |
. |
- |
. |
ID=Dca13796.1.exon4;Parent=Dca13796.1 |
