Dca13797.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1644)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13797.1 |
17 |
340 |
375 |
31.2 |
324 |
33 |
9e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
6 |
363 |
1501 |
23.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13797.1 |
39 |
210 |
375 |
14.13 |
172 |
31 |
5e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1644 |
Augustus |
mRNA |
6371 |
8150 |
. |
- |
. |
ID=Dca13797.1;Parent=Dca13797 |
| scaffold1644 |
Augustus |
exon |
6371 |
6477 |
. |
- |
. |
ID=Dca13797.1.exon1;Parent=Dca13797.1 |
| scaffold1644 |
Augustus |
exon |
7130 |
8150 |
. |
- |
. |
ID=Dca13797.1.exon2;Parent=Dca13797.1 |
