Carnation DB

Dca1391.1

Annotation

6-exons
f-1
sp|D7LZQ3_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_487450#GO:0051087;GO:0031072;GO:0006457#2F1P0C
AT5G06410.1 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:1959719-1961132 REVERSE LENGTH=252
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1391.1	99	235	295	21.35	137	42	2e-25
Target_name	Start	End	Length	Cov(%)
sp\|D7LZQ3_ARALL	70	217	255	58.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1391.1	99	234	295	21.35	136	42	2e-26
Target_name	Start	End	Length	Cov(%)
AT5G06410.1	67	213	252	58.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augus-PASA	mRNA	234458	237146	.	+	.	ID=Dca1391.1;Parent=Dca1391
scaffold104	Augus-PASA	exon	234458	234861	.	+	.	ID=Dca1391.1.exon1;Parent=Dca1391.1
scaffold104	Augus-PASA	exon	235480	235576	.	+	.	ID=Dca1391.1.exon2;Parent=Dca1391.1
scaffold104	Augus-PASA	exon	235666	235755	.	+	.	ID=Dca1391.1.exon3;Parent=Dca1391.1
scaffold104	Augus-PASA	exon	236170	236241	.	+	.	ID=Dca1391.1.exon4;Parent=Dca1391.1
scaffold104	Augus-PASA	exon	236828	236899	.	+	.	ID=Dca1391.1.exon5;Parent=Dca1391.1
scaffold104	Augus-PASA	exon	236994	237146	.	+	.	ID=Dca1391.1.exon6;Parent=Dca1391.1